STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CU098_005974Uncharacterized protein. (329 aa)    
Predicted Functional Partners:
DFR1
Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
   
 
 0.762
TUBGCP5
Spindle pole body component.
    
  0.675
CU098_001380
CoA carboxyltransferase N-terminal domain-containing protein.
   
 0.647
CU098_005455
CoA carboxyltransferase C-terminal domain-containing protein.
   
 0.647
TUBGCP4
Spindle pole body component.
    
 0.634
TUB4_1
Gamma-tubulin; Belongs to the tubulin family.
   
 0.531
TUB4_2
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.531
CU098_010471
Bap31 domain-containing protein.
   
 0.530
CU098_005749
Spindle pole body component.
    
 0.521
CU098_013521
Spindle pole body component.
    
 0.521
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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