STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSH3_3Mismatch repair protein msh3. (453 aa)    
Predicted Functional Partners:
MSH2_1
MutS-like protein.
 
 0.996
MSH1_1
DNA mismatch repair ATPase msh1.
 
 
 0.995
MSH6_1
DNA mismatch repair protein msh6.
 
 
0.977
MSH6_2
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 
0.972
POL30
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.965
MSH2_3
MutS-like protein.
 
 
 0.961
MSH2_2
MutS-like protein.
  
0.960
CU098_007941
MutL_C domain-containing protein.
 
 0.939
MLH1_1
DNA mismatch repair protein.
 
 0.937
MSH1_2
DNA mismatch repair ATPase msh1.
  
0.937
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.