STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_005899Uncharacterized protein. (337 aa)    
Predicted Functional Partners:
CU098_001964
Uncharacterized protein.
   
  0.610
CU098_010616
Uncharacterized protein.
   
  0.610
CU098_004431
Uncharacterized protein.
  
 
  0.484
MYSM1_1
Myb-like, SWIRM and MPN domains 1.
    
  0.483
MYSM1_2
Myb-like, SWIRM and MPN domains 1.
    
  0.483
MYSM1_3
Myb-like, SWIRM and MPN domains 1.
    
  0.483
CU098_011618
MPN domain-containing protein.
    
  0.483
MYSM1_4
Myb-like, SWIRM and MPN domains 1.
    
  0.483
GDE1_2
Glycerophosphocholine phosphodiesterase.
   
 0.475
CU098_012804
Uncharacterized protein.
  
 
  0.475
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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