STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CU098_004261Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (409 aa)    
Predicted Functional Partners:
CU098_009656
Reticulon domain-containing protein.
    
  0.486
CU098_007798
Reticulon-like protein.
    
  0.486
CU098_013393
Reticulon-like protein.
    
  0.486
RTN1
Reticulon-like protein.
    
  0.486
CU098_001192
Uncharacterized protein.
   
 0.449
CU098_004137
Uncharacterized protein.
   
 0.449
CU098_005398
Uncharacterized protein.
   
 0.449
CU098_004734
Uncharacterized protein.
   
 0.449
CU098_010244
Uncharacterized protein.
   
 0.449
CU098_001162
Uncharacterized protein.
   
 0.449
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.