STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DPB2DNA-directed DNA polymerase epsilon, subunit B. (314 aa)    
Predicted Functional Partners:
CU098_004655
DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family.
   
 0.997
CU098_004781
G-patch domain-containing protein.
   
 0.997
CU098_009983
CBFD_NFYB_HMF domain-containing protein.
    
 0.996
MCM6
DNA helicase; Belongs to the MCM family.
   
 0.995
MCM10
Minichromosome maintenance-protein.
   
 0.990
POL2_4
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
  
 0.990
MCM2_1
DNA helicase; Belongs to the MCM family.
   
 0.990
MCM2_2
DNA helicase; Belongs to the MCM family.
   
 0.990
POL2_5
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.988
CU098_002792
MCM domain-containing protein; Belongs to the MCM family.
   
 0.988
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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