STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_007246WD_REPEATS_REGION domain-containing protein. (166 aa)    
Predicted Functional Partners:
POL30
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.987
CU098_006228
Uncharacterized protein.
   
 0.977
DDB1A_1
DNA damage-binding protein 1a.
    
 0.947
DDB1A_3
DNA damage-binding protein 1a.
    
 0.947
DDB1A_4
DNA damage-binding protein 1a.
    
 0.947
DDB1A_2
DNA damage-binding protein 1a.
    
 0.947
CUL4B_1
Cullin-4B; Belongs to the cullin family.
    
 0.933
CUL4A
Cullin-4A; Belongs to the cullin family.
    
 0.933
CUL4B_2
Cullin-4B; Belongs to the cullin family.
    
 0.933
CDC6_1
AAA ATPase.
   
  
 0.898
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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