STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CU098_005380Cyclin N-terminal domain-containing protein. (132 aa)    
Predicted Functional Partners:
PHO81_2
Phosphate system positive regulatory protein pho81.
    
 0.953
PHO81_1
Phosphate system positive regulatory protein pho81.
    
 0.953
GDE1_2
Glycerophosphocholine phosphodiesterase.
    
 0.860
GDE1_1
Glycerophosphocholine phosphodiesterase.
    
 0.860
CU098_008556
Uncharacterized protein.
    
 0.645
LIG4_1
DNA ligase (ATP); Belongs to the ATP-dependent DNA ligase family.
    
 0.624
LIG4_2
DNA ligase (ATP).
    
 0.624
ATG1
Serine/threonine-protein kinase.
    
  0.616
PHO85_1
Negative regulator of the PHO system; Belongs to the protein kinase superfamily.
    
 0.583
PHO85_2
Negative regulator of the PHO system; Belongs to the protein kinase superfamily.
    
 0.583
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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