STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_001865Uncharacterized protein. (481 aa)    
Predicted Functional Partners:
NDFIP2
Nedd4 interacting protein.
   
 
 0.585
CU098_003753
Uncharacterized protein.
     
 0.423
CU098_013332
Uncharacterized protein.
     
 0.423
TEF3_4
Translational elongation factor EF-1 alpha.
     
 0.417
TEF3_3
Translational elongation factor EF-1 alpha.
     
 0.417
TEF3_1
Translational elongation factor EF-1 alpha.
     
 0.417
VMA3_1
V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
    
  0.417
TEF3_2
Translational elongation factor EF-1 alpha.
     
 0.417
TEF3_5
Translational elongation factor EF-1 alpha.
     
 0.417
TEF3_6
Translational elongation factor EF-1 alpha.
     
 0.417
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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