STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_003173Uncharacterized protein. (214 aa)    
Predicted Functional Partners:
GSP1
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.941
CU098_000174
Importin N-terminal domain-containing protein.
 
     0.925
CU098_002559
Uncharacterized protein.
    
 
 0.780
EXOSC7
Exosome complex component RRP42.
   
 
  0.673
CU098_002083
S1 motif domain-containing protein.
   
 
  0.651
CU098_013940
Uncharacterized protein.
   
 
  0.651
CU098_004728
C3H1-type domain-containing protein.
    
 
 0.648
CU098_008943
Uncharacterized protein.
    
 
 0.648
EXOSC9
Exosome complex component RRP45.
   
 
  0.646
CU098_012098
Uncharacterized protein.
   
 
  0.646
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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