STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMARCAL1SWI/SNF-matrix-associated actin-dependent regulator of chromatin sub A-like protein 1. (507 aa)    
Predicted Functional Partners:
POL30
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.928
RFA1_1
Replication factor A protein 1.
    
 0.906
RFA1_2
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.906
RFA2
Replication factor A protein 2.
   
 0.837
CU098_006228
Uncharacterized protein.
   
 0.832
MPH1_1
3'-5' DNA helicase.
   
 0.788
MPH1_2
3'-5' DNA helicase.
   
 0.788
RPB6
DNA-directed RNA polymerases I II and III subunit RPABC2.
   
 0.761
CU098_012376
Uncharacterized protein.
   
 0.752
CU098_010431
3'-5' exonuclease domain-containing protein.
  
 
 0.718
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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