STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_004648B30.2/SPRY domain-containing protein. (454 aa)    
Predicted Functional Partners:
CU098_000158
Uncharacterized protein.
 
      0.888
UBP12_2
CSN-associated deubiquitinating enzyme Ubp12.
   
 0.699
UBP12_1
CSN-associated deubiquitinating enzyme Ubp12; Belongs to the peptidase C19 family.
   
 0.699
CU098_005124
USP domain-containing protein.
   
 0.699
UBP12_3
CSN-associated deubiquitinating enzyme Ubp12; Belongs to the peptidase C19 family.
   
 0.699
USP15
Ubiquitin carboxyl-terminal hydrolase.
   
 0.699
CU098_003879
DUSP domain-containing protein.
   
 0.684
CU098_012498
Uncharacterized protein.
   
 0.684
CU098_000943
E2_bind domain-containing protein.
     
 0.558
UFD4_1
Ubiquitin fusion degradation protein 4.
    
  0.557
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.