STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CU098_001518Aminotran_1_2 domain-containing protein. (210 aa)    
Predicted Functional Partners:
TRP1_1
Bifunctional tryptophan synthase trp1.
    
 0.928
TRP1_2
Bifunctional tryptophan synthase trp1.
    
 0.928
TRP5_1
Tryptophan synthase.
    
 0.824
TRP5_2
Tryptophan synthase.
    
 0.824
TRP5_3
Tryptophan synthase.
    
 0.824
SPE2
Spermidine resistance protein.
     
 0.818
ARG11
N-acetyl-gamma-glutamyl-phosphate reductase/acetylglutamate kinase.
  
 
 0.806
CU098_013633
N-acetyltransferase domain-containing protein; In the N-terminal section; belongs to the acetylglutamate kinase family.
  
 
 0.806
CU098_011875
Uncharacterized protein.
    
 0.791
CU098_000810
PABS domain-containing protein.
   
 0.787
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.