Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CDC23Anaphase-promoting complex subunit 23. (511 aa)    
Predicted Functional Partners:
CU098_000453
ANAPC4 domain-containing protein.
   
 0.994
CDC16_2
Anaphase promoting complex subunit cdc16.
   
 0.993
CDC16_1
Anaphase promoting complex subunit cdc16.
   
 0.993
ANAPC2
Anaphase-promoting complex subunit 2; Belongs to the cullin family.
   
 0.992
CU098_006015
RING-type domain-containing protein.
    
 0.988
APC1_1
Anaphase-promoting complex subunit 1.
   
 0.987
APC1_2
Anaphase-promoting complex subunit 1.
   
 0.987
CDC27
Anaphase-promoting complex subunit cdc27.
  
 0.984
CU098_000882
TPR_REGION domain-containing protein.
  
0.984
CU098_004257
DOC domain-containing protein.
   
 0.983
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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