STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GDA1_4Guanosine-diphosphatase; Belongs to the GDA1/CD39 NTPase family. (457 aa)    
Predicted Functional Partners:
YND1_2
Golgi apyrase; Belongs to the GDA1/CD39 NTPase family.
    
 0.839
YND1_1
Golgi apyrase; Belongs to the GDA1/CD39 NTPase family.
    
 0.839
DFR1
Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
     
  0.820
ATPBD4
ATP binding domain 4.
     
  0.810
CU098_007767
Uncharacterized protein.
    
 0.796
CU098_000979
Uncharacterized protein.
     
 0.755
APT1
Adenine phosphoribosyltransferase.
   
 
 0.754
NDK1
Nucleoside diphosphate kinase.
     
 0.744
IMD1_1
Inosine-5'-monophosphate dehydrogenase.
   
 
  0.741
CU098_006630
Pribosyltran domain-containing protein.
   
 
  0.735
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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