STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_000700Rhomboid domain-containing protein. (341 aa)    
Predicted Functional Partners:
MGM1
Dynamin-like GTPase mgm1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 
 0.837
STOML2
Stomatin-like protein 2, mitochondrial.
   
 0.793
CU098_001554
AAA domain-containing protein.
   
 
 0.756
CU098_003473
AAA domain-containing protein.
   
 
 0.756
CU098_003475
AAA domain-containing protein.
   
 
 0.756
PHB2
Prohibitin.
   
 0.717
CU098_006206
Uncharacterized protein.
   
 0.717
CU098_005621
Uncharacterized protein.
    
  0.600
CU098_002806
Uncharacterized protein.
    
  0.600
CU098_006258
Uncharacterized protein.
    
  0.600
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.