STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_001866Uncharacterized protein. (615 aa)    
Predicted Functional Partners:
CU098_001150
Uncharacterized protein.
 
  
  0.965
ELP3_1
Elongator subunit.
   
 0.964
ELP3_2
Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.
   
 0.964
CU098_000042
Uncharacterized protein.
   
 0.961
ELP4
Elongator subunit elp4.
   
 0.961
ELP2_2
Elongator subunit elp2.
    
 0.932
ELP2_1
Elongator subunit elp2.
    
 0.932
ELP5
Elongator complex protein.
   
 0.922
CU098_001803
Uncharacterized protein.
   
 0.883
CU098_007445
Uncharacterized protein.
   
 0.883
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.