STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_005627Uncharacterized protein. (324 aa)    
Predicted Functional Partners:
CU098_003932
Uncharacterized protein.
   
 0.986
CU098_011926
Uncharacterized protein.
   
 0.986
CU098_002835
Uncharacterized protein.
    
 0.976
CU098_011641
TRAF-type domain-containing protein.
    
 0.976
CRP79
Poly(A) binding protein Crp79.
   
 0.970
RPN9
26S proteasome regulatory subunit.
    
 0.965
UFD4_1
Ubiquitin fusion degradation protein 4.
    
 0.963
JHD1
JmjC domain-containing histone demethylation protein 1.
    
 0.962
CU098_013795
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.952
RPL36
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
 0.939
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.