Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CU098_002136Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (431 aa)    
Predicted Functional Partners:
CU098_000810
PABS domain-containing protein.
  
 0.929
CU098_007507
Uncharacterized protein; Belongs to the arginase family.
  
 
 0.921
ARG4
Argininosuccinate lyase.
  
 
 0.916
CAR2
Ornithine aminotransferase.
    
 0.913
CAR1_2
Arginase; Belongs to the arginase family.
  
 
 0.901
CAR1_3
Arginase; Belongs to the arginase family.
  
 
 0.901
ARG1_1
Argininosuccinate synthetase.
  
 
 0.883
ARG1_2
Argininosuccinate synthetase.
  
 
 0.883
CU098_002503
Homoserine_dh domain-containing protein.
  
 
 0.880
CU098_013995
N-acetyltransferase domain-containing protein.
    
 0.876
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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