STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_008427Uncharacterized protein. (111 aa)    
Predicted Functional Partners:
CU098_012376
Uncharacterized protein.
    
 0.997
CU098_001364
Uncharacterized protein.
    
 0.989
CU098_011935
Uncharacterized protein.
    
 0.989
CU098_004655
DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family.
    
  0.981
CU098_003071
DNA primase; Belongs to the eukaryotic-type primase small subunit family.
    
  0.978
RFA2
Replication factor A protein 2.
    
 0.972
POL12_2
DNA-directed DNA polymerase alpha subunit pol12.
    
  0.961
POL12_1
DNA-directed DNA polymerase alpha subunit pol12.
    
  0.961
POLA1_1
DNA polymerase.
    
  0.948
POL1
DNA polymerase.
    
  0.948
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.