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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_003962Uncharacterized protein. (153 aa)    
Predicted Functional Partners:
TRS33
Trafficking protein particle complex subunit 33.
   
 0.991
BET3
Trafficking protein particle complex subunit BET3.
   
 0.990
TRS31
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.
   
 0.990
TRAPPC2
Trafficking protein particle complex subunit 2.
    
 0.989
CU098_002795
Uncharacterized protein.
    
 0.986
TRAPPC8_1
Trafficking protein particle complex 8.
    
 0.981
TRAPPC8_2
Trafficking protein particle complex 8.
    
 0.981
CU098_002671
Uncharacterized protein.
    
 0.976
CU098_007459
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.976
YPT1_2
GTP-binding protein of the rab.
    
 0.970
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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