STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CU098_002424Aminotran_5 domain-containing protein. (336 aa)    
Predicted Functional Partners:
CU098_010843
Aminotran_1_2 domain-containing protein.
   
 
 0.906
BNA7
Kynurenine formamidase.
  
 
 0.902
CU098_007190
Uncharacterized protein.
   
 0.901
CU098_003294
Uncharacterized protein.
   
 0.901
NPT1
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
    
 
 0.845
CU098_000569
Aminotran_1_2 domain-containing protein.
   
 
 0.826
CU098_005586
Aminotran_1_2 domain-containing protein.
   
 
 0.826
CU098_011201
Uncharacterized protein.
     
  0.784
CU098_003180
Aminotran_1_2 domain-containing protein.
   
 
 0.777
CU098_010936
Uncharacterized protein.
   
 
 0.777
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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