STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_002424Aminotran_5 domain-containing protein. (336 aa)    
Predicted Functional Partners:
BNA7
Kynurenine formamidase.
  
 
 0.846
CU098_010843
Aminotran_1_2 domain-containing protein.
   
 
 0.833
CU098_007190
Uncharacterized protein.
   
 0.828
CU098_003294
Uncharacterized protein.
   
 0.828
CU098_000569
Aminotran_1_2 domain-containing protein.
   
 
 0.753
CU098_005586
Aminotran_1_2 domain-containing protein.
   
 
 0.753
CU098_001856
Uncharacterized protein.
  
 
 0.745
CU098_005025
Uncharacterized protein.
  
 
 0.745
CU098_004799
Uncharacterized protein.
  
 
 0.745
CU098_009556
Uncharacterized protein.
  
 
 0.745
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.