STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MYSM1_2Myb-like, SWIRM and MPN domains 1. (469 aa)    
Predicted Functional Partners:
CU098_007150
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.982
CU098_008036
Uncharacterized protein.
    
 0.982
GCN5_2
Histone acetyltransferase.
    
 0.982
GCN5_1
Histone acetyltransferase.
    
 0.982
CU098_002514
Uncharacterized protein.
    
 0.982
SPT7_1
Transcriptional activator spt7.
    
 0.982
GCN5_3
Histone acetyltransferase.
    
 0.982
SPT7_2
Transcriptional activator spt7.
    
 0.982
GCN5_4
Histone acetyltransferase.
    
 0.982
SPT7_3
Transcriptional activator spt7.
    
 0.982
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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