STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCBD1_1Putative pterin-4-alpha-carbinolamine dehydratase. (76 aa)    
Predicted Functional Partners:
CU098_005878
Uncharacterized protein.
  
 
 0.814
CU098_006960
Uncharacterized protein.
  
 
 0.764
CU098_012978
Uncharacterized protein.
  
  
 0.596
CU098_007490
TPR_REGION domain-containing protein.
  
  
 0.596
CU098_005263
Uncharacterized protein.
  
 
 0.595
CU098_011894
Uncharacterized protein.
  
 
 0.595
CU098_008616
PKS_ER domain-containing protein.
  
 
 0.593
CU098_008375
Uncharacterized protein.
  
 
 0.569
CU098_013604
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.569
CU098_005078
VOC domain-containing protein.
  
  
 0.546
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.