STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_001015Protein kinase domain-containing protein. (482 aa)    
Predicted Functional Partners:
SSS1
Sec61p translocation complex subunit.
   
 
 0.839
SEC63
Secretory subunit.
    
 
 0.838
SEC62
Translocation protein S62.
    
 
 0.834
CAB39
Calcium-binding protein 39.
   
 0.765
MO25
Mo25 protein.
   
 0.765
CU098_010278
Uncharacterized protein.
    
 
 0.717
SEC66
Translocation protein S66.
    
 
 0.717
SNF1_2
ATP binding protein.
  
 
  0.619
SEC61_1
Translocon subunit; Belongs to the SecY/SEC61-alpha family.
    
 
 0.587
SEC61_2
Translocon subunit; Belongs to the SecY/SEC61-alpha family.
    
 
 0.587
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.