STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_003971Aa_trans domain-containing protein. (432 aa)    
Predicted Functional Partners:
CU098_001514
Uncharacterized protein.
   
 0.710
CU098_002835
Uncharacterized protein.
    
 0.633
CU098_011641
TRAF-type domain-containing protein.
    
 0.633
SDH1
Succinate dehydrogenase (quinone); Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
   
 
 0.608
SMD3
Small nuclear ribonucleoprotein Sm D3.
   
 
  0.600
PGM3
Phosphoglucomutase-3; Belongs to the phosphohexose mutase family.
    
  0.594
CU098_004074
Uncharacterized protein.
    
 0.590
CU098_005120
Uncharacterized protein.
    
 0.590
COP1_2
Coatomer subunit alpha.
    
 0.590
COP1_3
Coatomer subunit alpha.
    
 0.590
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.