STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ATG17Autophagy-protein 17. (428 aa)    
Predicted Functional Partners:
ATG9
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
 0.995
ATG13
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
    
 0.995
CU098_000004
Fe2OG dioxygenase domain-containing protein.
    
 0.966
CU098_008560
Uncharacterized protein.
    
 0.966
CU098_005157
Uncharacterized protein.
    
 0.966
ATG1
Serine/threonine-protein kinase.
   
 
 0.958
CU098_004011
Uncharacterized protein.
    
 0.955
ATG11_1
Oligomeric, coiled-coil, peripheral membrane protein.
    
 0.955
ATG11_2
Oligomeric, coiled-coil, peripheral membrane protein.
    
 0.955
CU098_010683
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.
    
 
 0.942
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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