STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MIP1_1DNA-directed DNA polymerase gamma mip1. (646 aa)    
Predicted Functional Partners:
MPH1_1
3'-5' DNA helicase.
   
 
 0.893
MPH1_2
3'-5' DNA helicase.
   
 
 0.893
FANCD2_2
Fanconi anemia group D2 protein.
   
 0.839
FANCD2_1
Fanconi anemia group D2 protein.
   
 0.839
CU098_004081
SF4 helicase domain-containing protein.
   
 
 0.831
CU098_009695
AA_TRNA_LIGASE_II domain-containing protein.
   
 
 0.818
GRS1_2
Glycine--tRNA ligase 1, mitochondrial.
   
 
 0.818
GRS1_1
Glycine--tRNA ligase 1, mitochondrial.
   
 
 0.818
CU098_002249
FPG_CAT domain-containing protein.
  
  
 0.813
RNASEH1_1
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
    
 0.812
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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