STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CU098_008471Uncharacterized protein. (155 aa)    
Predicted Functional Partners:
CU098_001703
Uncharacterized protein.
   
 0.988
CU098_003874
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
 0.985
MRPL23
54S ribosomal protein L23, mitochondrial; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.980
MRPL37
39S ribosomal protein L37, mitochondrial.
   
 
 0.971
MRPL17
54S ribosomal protein L17 mitochondrial.
   
 0.964
MRP4
37S ribosomal protein, mitochondrial.
   
 
 0.961
CU098_007816
Uncharacterized protein.
   
 0.959
MRPL3
54S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 0.957
MRPL2
54S ribosomal protein L2 mitochondrial.
   
 
 0.956
MRPL46
39S ribosomal protein L46, mitochondrial; Belongs to the Nudix hydrolase family.
   
 0.953
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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