STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_002336Abhydrolase_2 domain-containing protein. (286 aa)    
Predicted Functional Partners:
GDE1_2
Glycerophosphocholine phosphodiesterase.
   
 0.832
GDE1_1
Glycerophosphocholine phosphodiesterase.
   
 0.832
PHO81_2
Phosphate system positive regulatory protein pho81.
   
 0.792
PHO81_1
Phosphate system positive regulatory protein pho81.
   
 0.792
CU098_007867
Hydrolase_4 domain-containing protein.
     
 0.749
CU098_001251
GP-PDE domain-containing protein.
    
 0.662
CU098_001474
WD_REPEATS_REGION domain-containing protein.
    
 
 0.630
CU098_007168
Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.
   
 
 0.620
LPCAT3
Lysophosphatidylcholine acyltransferase 3; Belongs to the membrane-bound acyltransferase family.
   
 
 0.620
AGPAT9
1-acylglycerol-3-phosphate O-acyltransferase 6 (Lysophosphatidic acid acyltransferase, zeta).
  
 
  0.605
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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