STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CU098_005128Uncharacterized protein. (177 aa)    
Predicted Functional Partners:
CU098_013811
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.954
CU098_006790
Uncharacterized protein.
   
 0.948
CU098_001694
Uncharacterized protein.
   
 0.948
CU098_004297
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.948
NEDD8
Nedd8-conjugating enzyme UBE2F.
   
 0.933
CU098_012679
Ubiquitin-like domain-containing protein.
   
 0.933
CU098_000328
AMP-binding domain-containing protein.
    
 0.932
CU098_003885
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.927
ARF1
Arf GTPase arf1.
   
 0.927
CU098_000533
Uncharacterized protein.
   
 0.927
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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