STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CU098_000202Uncharacterized protein. (104 aa)    
Predicted Functional Partners:
CU098_013205
Alpha-amylase.
    
 0.757
UGP1_2
UTP-glucose-1-phosphate uridylyltransferase.
     
 0.677
UGP1_3
UTP--glucose-1-phosphate uridylyltransferase.
     
 0.677
UGP1_1
UTP-glucose-1-phosphate uridylyltransferase.
     
 0.677
FKS1_5
1,3-beta-D-glucan synthase.
 
     0.668
MPG1_1
Mannose-1-phosphate guanyltransferase.
     
 0.657
MPG1_2
Mannose-1-phosphate guanyltransferase.
     
 0.657
FKS1_3
1,3-beta-D-glucan synthase.
 
     0.652
FKS1_2
1,3-beta-D-glucan synthase.
 
     0.610
CU098_004436
LIM zinc-binding domain-containing protein.
    
 0.597
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.