STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CU098_003990Uncharacterized protein. (286 aa)    
Predicted Functional Partners:
DYNLT1
Dynein light chain Tctex-type.
    
 0.976
CU098_007296
WD_REPEATS_REGION domain-containing protein.
   
 0.961
CU098_000240
WD_REPEATS_REGION domain-containing protein.
   
 0.961
DYNLL1
Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures.
    
 0.954
CU098_007502
Urease domain-containing protein.
    
 0.954
PAC1_1
Protein with putative role during mitosis.
    
 0.952
PAC1_3
Protein with putative role during mitosis.
    
 0.952
DCTN2
Dynactin subunit 2.
    
 0.950
CU098_010259
Uncharacterized protein.
    
 0.950
CU098_004695
Uncharacterized protein.
    
 0.940
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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