Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CU098_001531Uncharacterized protein. (312 aa)    
Predicted Functional Partners:
CU098_003657
Uncharacterized protein.
    
 
 0.866
HIS2AV
Histone H2A; Belongs to the histone H2A family.
    
 0.704
CU098_005773
BHLH domain-containing protein.
    
 
 0.689
CU098_011370
BHLH domain-containing protein.
    
 
 0.689
VPS72
Vacuolar protein sorting-associated protein 72.
    
   0.653
CU098_010533
YL1_C domain-containing protein.
    
   0.653
CU098_001722
Uncharacterized protein.
    
 0.622
NTE1_1
Phosphatidylcholine and lysophosphatidylcholine phospholipase.
    
 
 0.599
CU098_009870
BHLH domain-containing protein.
    
 
 0.599
NTE1_2
Lysophospholipase NTE1; Intracellular phospholipase B that catalyzes the double deacylation of phosphatidylcholine (PC) to glycerophosphocholine (GroPCho). Plays an important role in membrane lipid homeostasis.
    
 
 0.599
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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