Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CU098_007919Uncharacterized protein. (290 aa)    
Predicted Functional Partners:
CSE1_1
Importin-alpha export receptor.
   
 0.922
CSE1_2
Importin-alpha export receptor.
   
 0.922
KAP95_1
Karyopherin beta.
   
 0.893
KAP95_2
Karyopherin beta.
   
 0.893
CU098_002467
Uncharacterized protein.
   
 
 0.875
CU098_006558
Uncharacterized protein.
   
 
 0.875
GSP1
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.784
CU098_009880
RanBD1 domain-containing protein.
   
 
 0.765
CU098_013683
RanBD1 domain-containing protein.
   
 
 0.765
CU098_003084
ULP_PROTEASE domain-containing protein.
    
 
 0.759
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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