STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECM16_3Putative ATP-dependent RNA helicase DHR1. (595 aa)    
Predicted Functional Partners:
CU098_011407
Uncharacterized protein.
   
 0.995
CU098_012555
Uncharacterized protein.
   
 0.995
MIS3
Ribosomal RNA assembly protein mis3.
   
 0.988
NOP14_2
Nucleolar complex protein 14.
 
 
 0.986
NOP14_1
Nucleolar complex protein 14.
 
 
 0.986
CU098_002560
Uncharacterized protein.
   
 
 0.980
CU098_013149
Sas10 domain-containing protein.
   
 0.976
CU098_013920
Sas10 domain-containing protein.
   
 0.976
WDR75
WD repeat-containing protein 75.
   
  0.969
UTP7_2
Small subunit (SSU) processome component.
   
 0.968
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.