STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CU098_003130Glyco_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family. (395 aa)    
Predicted Functional Partners:
COX12
Cytochrome c oxidase polypeptide vib.
   
 0.894
COX4
Cytochrome c oxidase subunit IV.
   
 0.893
CU098_013886
Uncharacterized protein.
   
 0.893
COX13
Cytochrome c oxidase subunit 6A; Belongs to the cytochrome c oxidase subunit 6A family.
   
 0.832
COX15_2
Protein required for the hydroxylation of heme O to form heme A, cox15.
    
 0.817
COX10
Heme O synthase.
    
  0.705
COX15_1
Protein required for the hydroxylation of heme O to form heme A, cox15.
    
 0.690
TRP5_1
Tryptophan synthase.
     
  0.690
TRP5_2
Tryptophan synthase.
     
  0.690
TRP5_3
Tryptophan synthase.
     
  0.690
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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