KIF21B_1 protein (Rhizopus stolonifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KIF21B_1

Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (591 aa)

Predicted Functional Partners:

KLP8_10

0.933

CIN8_1

0.888

CIN8_2

0.888

CU098_011216

0.854

CU098_002599

0.854

CU098_002115

0.854

KAR3_1

0.841

KAR3_2

0.841

CU098_002732

0.767

KLP8_5

0.757

Your Current Organism:

Rhizopus stolonifer

NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CIN8_1	CU098_002115	A0A367KA33	A0A367KS62	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Peptidase C50 domain-containing protein.	0.777
CIN8_1	CU098_002599	A0A367KA33	A0A367KEF8	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.777
CIN8_1	CU098_002732	A0A367KA33	A0A367KKY8	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Dsl1_C domain-containing protein.	0.673
CIN8_1	CU098_011216	A0A367KA33	A0A367KCB6	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Peptidase C50 domain-containing protein.	0.777
CIN8_1	KAR3_1	A0A367KA33	A0A367IKG9	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like nuclear fusion protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.989
CIN8_1	KAR3_2	A0A367KA33	A0A367JQB3	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like nuclear fusion protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.989
CIN8_1	KIF21B_1	A0A367KA33	A0A367IYA3	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.888
CIN8_1	KLP8_10	A0A367KA33	A0A367K194	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein Klp8.	0.954
CIN8_1	KLP8_5	A0A367KA33	A0A367KJZ6	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein Klp8.	0.908
CIN8_2	CU098_002115	A0A367KTB5	A0A367KS62	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Peptidase C50 domain-containing protein.	0.777
CIN8_2	CU098_002599	A0A367KTB5	A0A367KEF8	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.777
CIN8_2	CU098_002732	A0A367KTB5	A0A367KKY8	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Dsl1_C domain-containing protein.	0.673
CIN8_2	CU098_011216	A0A367KTB5	A0A367KCB6	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Peptidase C50 domain-containing protein.	0.777
CIN8_2	KAR3_1	A0A367KTB5	A0A367IKG9	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like nuclear fusion protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.989
CIN8_2	KAR3_2	A0A367KTB5	A0A367JQB3	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like nuclear fusion protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.989
CIN8_2	KIF21B_1	A0A367KTB5	A0A367IYA3	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.888
CIN8_2	KLP8_10	A0A367KTB5	A0A367K194	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein Klp8.	0.954
CIN8_2	KLP8_5	A0A367KTB5	A0A367KJZ6	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein Klp8.	0.885
CU098_002115	CIN8_1	A0A367KS62	A0A367KA33	Peptidase C50 domain-containing protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.777
CU098_002115	CIN8_2	A0A367KS62	A0A367KTB5	Peptidase C50 domain-containing protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.777