STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_006221ANK_REP_REGION domain-containing protein. (548 aa)    
Predicted Functional Partners:
SEH1
Epoxide hydrolase, soluble (SEH); Belongs to the WD repeat SEC13 family.
   
  0.651
CU098_000342
Uncharacterized protein.
 
      0.644
CFD1
Cytosolic Fe-S cluster assembly factor cfd1.
     
 0.607
NBP35
Cytosolic Fe-S cluster assembly factor NBP35; Component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NBP35-CFD1 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins; Belongs to the Mrp/NBP35 ATP-binding proteins family. NUBP1/NBP35 subfamily.
     
 0.607
CU098_008590
Uncharacterized protein.
     
 0.607
CU098_003723
M20_dimer domain-containing protein.
     
 0.509
CU098_003079
WD_REPEATS_REGION domain-containing protein.
     
 0.509
CU098_007221
WD_REPEATS_REGION domain-containing protein.
     
 0.509
CU098_003186
WD_REPEATS_REGION domain-containing protein.
     
 0.509
CU098_002860
M20_dimer domain-containing protein.
     
 0.509
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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