STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_000891Uncharacterized protein. (605 aa)    
Predicted Functional Partners:
PES1_1
mRNA-binding ribosome synthesis protein.
   
 0.825
PES1_2
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.825
CU098_000994
CID domain-containing protein.
   
 0.804
CU098_008832
Smg4_UPF3 domain-containing protein.
    
 0.790
CU098_006115
Ubiquitin-like domain-containing protein.
   
 0.781
RBM8A
RNA-binding protein 8A.
    
 0.777
MTR4_2
ATP-dependent RNA helicase mtr4.
   
 0.776
MTR4_1
ATP-dependent RNA helicase mtr4.
   
 0.776
CU098_007863
Uncharacterized protein.
  
  0.774
CU098_006336
GN3L_Grn1 domain-containing protein.
  
  0.774
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.