STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CU098_000117Uncharacterized protein. (133 aa)    
Predicted Functional Partners:
CU098_013679
Uncharacterized protein.
    
 0.831
FLD1
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.772
CU098_009565
Amino_oxidase domain-containing protein.
    
 0.768
CU098_000804
Amino_oxidase domain-containing protein.
    
 0.768
CU098_012463
Uncharacterized protein.
    
 0.768
SNRPA1
U2 small nuclear ribonucleoprotein A.
     
 0.764
CU098_000761
Uncharacterized protein.
  
 
  0.761
CU098_001843
Uncharacterized protein.
  
 
  0.761
CU098_005499
Uncharacterized protein.
  
 
 0.747
CU098_006881
Uncharacterized protein.
  
 
 0.747
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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