STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_003221Chromo domain-containing protein. (131 aa)    
Predicted Functional Partners:
CU098_004270
Uncharacterized protein.
   
 0.957
HHT1_1
Histone H3; Belongs to the histone H3 family.
   
 0.902
HHT1_2
Histone H3.1.
   
 0.902
CU098_004681
Uncharacterized protein.
    
 0.886
HIS71
Histone H3.3 type 1.
    
 0.863
SRSF4
Serine arginine-rich splicing factor.
    
 0.797
CU098_005127
Uncharacterized protein.
    
 0.792
CU098_000553
ANK_REP_REGION domain-containing protein.
    
 0.792
CU098_013437
SET domain-containing protein.
    
 0.792
HIS2AV
Histone H2A; Belongs to the histone H2A family.
   
 0.791
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.