STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_002892FYVE-type domain-containing protein. (309 aa)    
Predicted Functional Partners:
CU098_005225
ANK_REP_REGION domain-containing protein.
 
      0.660
RAB7
Ras-protein Rab-7.
     
 0.651
RAB4A
Ras-protein Rab-4A.
    
  0.644
RAB4B
Ras-protein Rab-4B.
    
  0.644
CU098_010257
Uncharacterized protein.
    
 0.635
CU098_010370
Uncharacterized protein.
    
 0.635
CU098_013918
Uncharacterized protein.
    
 0.635
CU098_010937
Protein kinase domain-containing protein.
    
 0.616
PHB2
Prohibitin.
    
  0.555
CU098_006206
Uncharacterized protein.
    
  0.555
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.