STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHS3_4Chitin synthase, class 3. (358 aa)    
Predicted Functional Partners:
CU098_002022
Uncharacterized protein.
   
 0.656
CU098_000879
UBA domain-containing protein.
   
 0.656
CU098_005128
Uncharacterized protein.
   
 0.656
CU098_005572
UBA domain-containing protein.
   
 0.656
CDC27
Anaphase-promoting complex subunit cdc27.
   
  0.649
CU098_006687
TPR_REGION domain-containing protein.
   
  0.649
RPAP3
RNA polymerase II-associated protein 3.
   
  0.649
CU098_008058
Uncharacterized protein.
   
  0.649
CU098_006133
Uncharacterized protein.
   
  0.649
SSN6_3
Glucose repression mediator protein.
   
  0.649
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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