STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_009150Uncharacterized protein. (162 aa)    
Predicted Functional Partners:
RPL5
60S ribosomal protein L5.
   
   0.939
CU098_000033
Ribosomal_L16 domain-containing protein.
   
 
 0.936
RPS13
Ribosomal 40S subunit protein S13; Belongs to the universal ribosomal protein uS15 family.
   
   0.934
RPS7
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
   0.934
CU098_013795
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
   0.933
RPL32
60S ribosomal protein L32.
    
   0.932
CU098_002542
Ribos_L4_asso_C domain-containing protein.
   
   0.932
RPS29
40S ribosomal protein S29.
   
   0.929
RPL35
60S ribosomal protein L35.
   
   0.927
RPL36
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
   0.927
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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