STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_010170Uncharacterized protein. (65 aa)    
Predicted Functional Partners:
CU098_005497
Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family.
    
 
 0.581
CU098_002151
Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family.
    
 
 0.581
CU098_007561
Uncharacterized protein.
    
 
 0.506
CU098_012112
Uncharacterized protein.
    
 
 0.506
GPT1
GABA/polyamine transporter.
    
 
 0.506
CU098_004666
Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family.
    
 
 0.439
AGL1
Alpha-glucosidase maltase; Belongs to the glycosyl hydrolase 31 family.
    
 
 0.439
CU098_003959
Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family.
    
 
 0.439
CU098_000314
Uncharacterized protein.
    
 
 0.439
CU098_012398
Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family.
    
 
 0.439
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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