STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_005944Uncharacterized protein. (654 aa)    
Predicted Functional Partners:
CU098_006853
AMPKBI domain-containing protein.
   
 0.814
PRKAB1
Protein kinase, AMP-activated, beta.
   
 0.814
CU098_002099
AMPKBI domain-containing protein.
   
 0.814
TRP5_1
Tryptophan synthase.
  
 
 0.797
TRP5_2
Tryptophan synthase.
  
 
 0.797
TRP5_3
Tryptophan synthase.
  
 
 0.797
GUA1_1
GMP synthase (Glutamine-hydrolyzing).
  
 0.782
GUA1_2
GMP synthase (Glutamine-hydrolyzing).
  
 0.782
TRP1_1
Bifunctional tryptophan synthase trp1.
  
 
 0.780
TRP1_2
Bifunctional tryptophan synthase trp1.
  
 
 0.780
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.