STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSK1_1Ssk1 response regulator receiver. (812 aa)    
Predicted Functional Partners:
CU098_006491
HPt domain-containing protein.
    
 0.987
SSK2
Suppressor of Sensor Kinase (SLN1).
    
 0.982
SHO1_1
Transmembrane osmosensor.
    
 
 0.674
CU098_013640
Uncharacterized protein.
    
 
 0.674
CU098_006707
Uncharacterized protein.
    
 
 0.654
CYC1_1
Iso-1-cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 
 0.579
CU098_003954
Peripheral subunit-binding (PSBD) domain-containing protein.
    
 0.578
KGD2_2
2-oxoglutarate dehydrogenase complex E2 component.
    
 0.578
LAT1
Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
    
 0.578
CU098_010277
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
    
 0.578
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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