STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUP35_1Translation termination factor GTPase eRF3. (508 aa)    
Predicted Functional Partners:
ETF1
Electron transfer flavoprotein alpha-subunit.
   
 0.993
UPF1
ATP-dependent helicase NAM7.
    
 0.950
PAB1
Protein phosphatase PP2A regulatory subunit B.
   
 0.945
MET14
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
 
  
   0.912
ABCE1
ATP-binding cassette sub-E member 1.
   
 
 0.822
RPS3_1
40S ribosomal protein S3.
   
 0.784
RPS3_2
40S ribosomal protein S3.
   
 0.784
CU098_003753
Uncharacterized protein.
   
 
 0.764
CU098_013332
Uncharacterized protein.
   
 
 0.764
RPS13
Ribosomal 40S subunit protein S13; Belongs to the universal ribosomal protein uS15 family.
   
  0.726
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.