STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_004259Uncharacterized protein. (313 aa)    
Predicted Functional Partners:
CU098_009187
LMWPc domain-containing protein.
    
 0.716
CU098_013807
PNP_UDP_1 domain-containing protein.
    
  0.664
CU098_003567
2Fe-2S ferredoxin-type domain-containing protein.
   
 
 0.659
COX15_2
Protein required for the hydroxylation of heme O to form heme A, cox15.
   
 
 0.659
CU098_002863
Thymidylate_kin domain-containing protein.
   
  0.658
CU098_013926
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
    
  0.656
GOT1
Golgi Transport.
    
  0.654
CU098_000850
Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.
   
   0.653
CU098_003509
GRIP domain-containing protein.
    
  0.633
CU098_000979
Uncharacterized protein.
    
  0.632
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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