STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSUN5Putative 28S rRNA (Cytosine-C(5))-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (421 aa)    
Predicted Functional Partners:
NIP7
Ribosome biosynthesis protein nip7.
  
 
 0.962
CU098_010983
RRM domain-containing protein.
   
 
 0.952
BRX1
RNA-binding protein required for bioproteinsis of the ribosomal 60S subunit; Belongs to the cyclin family.
   
 
 0.944
WDR12
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.942
RLP24
ATPase-activating ribosome biosynthesis protein.
   
 
 0.936
CU098_007214
Brix domain-containing protein.
   
   0.920
CU098_013959
Uncharacterized protein.
  
 
 0.920
CU098_009431
Ribosomal_L18e/L15P domain-containing protein.
    
 
 0.893
ERB1_2
Ribosome bioproteinsis protein erb1.
   
 
 0.880
ERB1_1
Ribosome bioproteinsis protein erb1.
   
 
 0.880
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
Server load: medium (56%) [HD]